Index

A

AbstractJob (class in mojo.jobManagement.jobs.abstractJob) AcousticPressureScales (class in mojo.analysis.acousticPressureScales) activateCommandLine() (TraceCommandList method) add_attachment() (Email method) add_recipient() (Email method) AddBasePathAction (class in mojo.pavayo.computeOptions) addChild() (Node method) addCommand() (TraceCommandList method) addCommandFromString() (Tracecommand method) addCommandLine() (TraceCommandList method) addCommandLineForTex() (TestSuiteTestCaseSub method) addCommandList() (TraceCommandList method) addCommandSettings() (Tracecommand method) addDataDictFromUList() (XYPlot method) addDataDictPlotStyleLabels() (XYPlot method) addDescriptionAndCommandline() (TestSuiteTestCaseSub method) addDifference() (CmpcResult method) addEquations() (PyTex method) addExecutable() (ExecutableResources method) AddExecutableAction (class in mojo.pavayo.computeOptions) addFigure() (PyTex method) addFigures() (TestSuiteTestCaseSub method) addFile() (PyTex method) addFileContent() (PyTex method) addGraph() (Graph method) addItemize() (PyTex method) addJob() (Graph method) (JobList method) addLongtable() (PyTex method) addMacroChangeSet() (BuildConfiguration method) addMakeCommand() (BuildConfiguration method) addMiniPage() (PyTex method)

addModules() (BuildConfiguration method) addMultipleExecutables() (ExecutableResources method) addOptionalSettings() (PyTex method) addPackage() (PyPackages method) addParent() (Node method) addReferenceCheckSummary() (TestSuiteTestCaseSub method) addSanitizersForTex() (TestSuiteTestCaseSub method) addSectionTitle() (PyTex method) addState() (FiniteStateMachine method) addSubFigure() (PyTex method) addTable() (PyTex method) addTabular() (PyTex method) addText() (PyTex method) addValgrindForTex() (TestSuiteTestCaseSub method) addVariable() (TecplotDataset method) addVerbatim() (PyTex method) addWatermark() (PyTex method) addZone() (TecplotDataset method) allJobs() (JobList property) allocateResources() (AbstractJob method) (Resources method) analyse() (SampleStats method) AnalysisJobSub (class in mojo.pavayo.testcase.testSuiteComponents) analyzeCmpcResultTestSuite() (in module mojo.traceSuiteControl.analysis.compareCGNS) append() (GeneralTestCaseSub method) (JobListSub method) (SpeedlineTestCaseSub method) (TestSuiteTestCaseSub method) (ValidationTestCaseSub method) areCmpcResultFilesEqual() (in module mojo.traceSuiteControl.analysis.compareCGNS) areFilesEqual() (CmpcResult method) AutorunAction (class in mojo.pavayo.computeOptions)

B

benchTRACE module bin.pavayo module bin.post module

bin.prep module bin.trace module buildBuildConfigurations() (ConfigurationFile method) BuildConfiguration (class in mojo.libdist.BuildConfiguration) buildGraph() (Graph method)

C

calculatedPriority() (Node property) calculatePriorities() (JobList method) calculatePriority() (Node method) callSoftwareVersionOption() (in module mojo.pavayo.executables.version) CGNSDataSet (class in mojo.cgns.cgnsFile) changeAttributes() (ExecutionMode method) (Membership method) changeDependenciesInElement() (in module updateXMLEntries) changeDependencyKeywords() (in module updateXMLEntries) changeExecutionmode() (Tracecommand method) (TraceCommandList method) changeMembership() (Tracecommand method) (TraceCommandList method) changeOptions() (Tracecommand method) (TraceCommandList method) checkExecutables() (in module mojo.bricabrac.fileIO) checkTracecommandAttributes() (Tracecommand method) cleanErrorFile() (in module mojo.pavayo.compute) cleanup() (AbstractJob method) cleanUp() (DistributionBuilder method) cleanup() (JobList method) (QSubJob method) cleanUp() (SCM method) (SourceCodeManager method) clear_attachments() (Email method) clear_recipients() (Email method) ClusterInfo (class in mojo.jobManagement.management.clusterInfo) CmpcResult (class in mojo.traceSuiteControl.analysis.cmpcFileParser) collectOutputFiles() (in module contrib.analyzeTRACEMetadata) Color (class in mojo.bricabrac.textIO) colorFileListing() (Color class method) colorString() (Color class method) CommandLineOptions (class in mojo.libdist.CommandLineOptions) commandLineString() (Membership method) CommandsSub (class in mojo.pavayo.testcase.testSuiteComponents) comp() (ReferenceCheckHandle property) compFilePath() (TestSuiteXYPlot property) compileLatexFile() (PyTex method)

compPlotDict() (TestSuiteXYPlot property) ConfigFileAction (class in mojo.libdist.CommandLineOptions) ConfigurationFile (class in mojo.libdist.ConfigurationFile) contrib.analyzeTRACEMetadata module convertCommandFile() (TraceCommandList method) convertErrorCodeToString() (in module mojo.pavayo.computeMethods) convertNumpyArrayToListOfFloatsOrNonnumericals() (in module mojo.referenceCheck.presenter) convertToHumandReadableSize() (in module mojo.bricabrac.stringFormatting) convertToJSON() (in module mojo.bricabrac.textIO) copy() (TecplotDataVariable method) copyDistributionToOutputPath() (DistributionBuilder method) copyZone() (TecplotDataset method) CPUInfo (class in mojo.jobManagement.management.cpuInfo) cpuInfo() (ClusterInfo property) createAnalysisGroup() (in module updateXMLEntries) createAndRunJobListForComputationPostprocessing() (in module mojo.pavayo.compute) createBenchJobList() (in module benchTRACE) createBuildConfigurations() (in module mojo.libdist.ConfigurationFile) createConvergenceMap() (in module mojo.plots.plotConvergence) createDependenciesDictionary() (in module mojo.pavayo.compute) createDistributionFile() (DistributionBuilder method) createDistributions() (in module mojo.libdist.DistributionBuilder) createFromPlot() (TestSuiteXYPlot static method) createFromScratch() (TecplotDataset class method) createGeneralTitlePageContent() (in module mojo.pavayo.computeMethods) createJoblist() (in module mojo.pavayo.compute) createJobListDictionary() (TestSuiteTestCaseSub method) createLibraries() (DistributionBuilder method) createMakeCommandLine() (DistributionBuilder method) createPerformanceMap() (in module mojo.plots.plotPerformance) createPlot() (TestSuiteTestCaseSub method) (ValidationTestCaseSub method) (XYPlot method) createRadialDistributionPlots() (in module mojo.plots.plotRadialDistributions) createReports() (in module mojo.pavayo.compute) createResourceDictionary() (in module mojo.pavayo.computeMethods) createTarFile() (SourceCodeManager method) createValidationTitlePageContent() (in module mojo.pavayo.computeMethods)

D

datfile module datfile.tecplotFile module datfile.tecplotVariable module datfile.tecplotZone module

deactivateCommandLine() (TraceCommandList method) deleteJournalFile() (GmcPlayForSpeedline method) deleteZone() (TecplotDataset method) delVariable() (TecplotDataset method) DependencySub (class in mojo.pavayo.testcase.testSuiteComponents) DiffFilter (class in mojo.traceSuiteControl.analysis.compareCGNS) diffType (DiffFilter attribute) DistributionBuilder (class in mojo.libdist.DistributionBuilder) downloadTestcases() (in module mojo.pavayo.compute)

E

Email (class in mojo.bricabrac.mail) ensurePath() (in module mojo.bricabrac.fileIO) error() (Printer class method) escapeChars() (PyTex static method) evaluatePerformance module ExecutableResources (class in mojo.pavayo.executables.executableResources)

executeGmcPlay() (GmcPlayForSpeedline method) ExecutionMode (class in mojo.traceSuiteControl.controlfile.executionmodeClass) exportLayout() (in module mojo.tecplot.export) extensions module extensions.autorun module extrapolateCoordinatesIntoGhostCellsStructured() (in module mojo.cgns.cgnsFile)

F

FigureWrapper (class in mojo.plotting.figureWrapper) filePath() (CGNSDataSet property) filterCollection() (in module contrib.analyzeTRACEMetadata) find() (RestartSetupSub method) (SetupSub method) (ValidationTestCaseSub method) findDuplicatesOfZone() (TecplotDataset method) findItems() (SelectedItemsByNameOrId method) findSubsetInJobList() (ValidationTestCaseSub method)

FiniteStateMachine (class in mojo.bricabrac.finiteStateMachine) forceSymlink() (in module mojo.bricabrac.fileIO) freeResources() (AbstractJob method) from_environment() (ClusterInfo class method) fromCGNS() (ReferenceCheck class method) (ReferenceCheckTree class method) fromDict() (ReferenceCheckTree class method) fromFile() (TecplotDataset class method) fromParameters() (Resources class method) fromTecplotASCII() (ReferenceCheck class method)

G

GeneralTestCaseSub (class in mojo.pavayo.testcase.generalTestCase) generateImage() (in module mojo.tecplot.export) get_autocorrelation() (AcousticPressureScales method) get_psd() (AcousticPressureScales method) get_spl() (AcousticPressureScales method) get_state_by_step() (TestSuiteTestCaseSub method) getAbsoluteFilePath() (in module mojo.bricabrac.fileIO) getArguments() (ValidationTestCaseSub static method) getAsDataFrame() (TecplotDataZone method) getCalcJob() (in module benchTRACE) getCheckReferencesJobList() (TestSuiteTestCaseSub method) getChildrenOfType() (CGNSDataSet static method) getCleanJob() (in module benchTRACE) getColonDelimitedTimeString() (in module mojo.bricabrac.stringFormatting) getCommand() (TraceCommandList method) getComputationJobList() (GeneralTestCaseSub method) (ParallelTestCaseSub method) (SpeedlineTestCaseSub method) (TestSuiteTestCaseSub method) (ValidationTestCaseSpeedlineSub method) (ValidationTestCaseSub method) getConnectivities() (CGNSDataSet method) getCoordinatesAtSolutionLocation() (CGNSDataSet method) getDataAsNumpyArray() (TecplotDataVariable method) getEnvironmentVariablesFromModules() (in module mojo.libdist.DistributionBuilder) getEvaluateReferencesJobList() (TestSuiteTestCaseSub method) getExportMacro() (in module mojo.tecplot.export) getFieldData() (CGNSDataSet method) getFigure() (FigureWrapper method) getFlattenedZoneData() (TecplotDataset method) getFlattenedZoneDataFromFile() (TecplotDataset class method) getFlowSolutionList() (CGNSDataSet method) getGccVersion() (DistributionBuilder method) getGmcPlayVersion() (in module mojo.gmcplay.gmcPlayJournal) getGridCoordinateNodeNames() (CGNSDataSet method) getHoursMinutesSeconds() (in module mojo.bricabrac.stringFormatting) getId() (IdGenerator method) getIJKzeroBased() (TecplotDataVariable method) (TecplotDataZone method) getIndexzeroBased() (TecplotDataVariable method) (TecplotDataZone method) getJob() (AnalysisJobSub method) (JobSub method) (SimulationJobSub method) getJobDictForJSON() (AbstractJob method) getKeyAndEnvironmentName() (ExecutableResources static method) getMeshingJobList() (GeneralTestCaseSub method) (TestSuiteTestCaseSub method)

getMOJOPythonPath() (in module mojo.pavayo.computeMethods) getOptions() (Tracecommand method) getOptionsFromParser() (in module mojo.pavayo.computeOptions) getOverallNumberOfElementsToRead() (TecplotDataZone method) getParser() (CommandLineOptions method) (in module mojo.pavayo.computeOptions) getPostCommandJobs() (ParallelTestCaseSub method) (SpeedlineTestCaseSub method) getPostCommands() (ValidationTestCaseSub static method) getPostprocessingJobList() (GeneralTestCaseSub method) (ParallelTestCaseSub method) (SpeedlineTestCaseSub method) (TestSuiteTestCaseSub method) (ValidationTestCaseSub method) getPrepCommands() (ValidationTestCaseSub static method) getReadyJobs() (Graph method) getRestartJobList() (GeneralTestCaseSub method) (TestSuiteTestCaseSub method) (ValidationTestCaseSpeedlineSub method) (ValidationTestCaseSub method) getRind() (CGNSDataSet method) getSingleSidedFrequencies() (WindowedFFT method) getSingleSidedSpectrum() (WindowedFFT method) getSingleTestcase() (in module benchTRACE) getSlice() (SliceSub method) getSoftwaresVersionNumbers() (in module mojo.pavayo.computeMethods) getSoftwareVersionNumberString() (in module mojo.pavayo.executables.version) getTCList() (in module benchTRACE) getTraceSuiteVersion() (DistributionBuilder method) getUsedExecutables() (GeneralTestCaseSub method) (TestSuiteTestCaseSub method) getVariable() (TecplotDataZone method) getVariableList() (CGNSDataSet method) getVersion() (ExecutableResources method) (SingleExecutableResource method) (Version method) getZoneByName() (TecplotDataset method) getZoneList() (CGNSDataSet method) globCopy() (in module mojo.bricabrac.fileIO) globCopy2() (in module mojo.bricabrac.fileIO) globMove() (in module mojo.bricabrac.fileIO) globRm() (in module mojo.bricabrac.fileIO) GmcPlayCreateJournalFile() (in module mojo.gmcplay.gmcPlayJournal) GmcPlayForSpeedline (class in mojo.gmcplay.gmcPlayForSpeedline) GmcPlayStringsBase (class in mojo.gmcplay.gmcplayStrings) Graph (class in mojo.jobManagement.graph.graph)

I

identical() (ReferenceCheckMain method) IdGenerator (class in mojo.jobManagement.management.idGenerator) ignoreDiff() (in module mojo.traceSuiteControl.analysis.compareCGNS) inControlFile() (in module mojo.gmcplay.gmcPlayForSpeedline)

initData() (TecplotDataVariable method) insert() (GeneralTestCaseSub method) (JobListSub method) (TestSuiteTestCaseSub method) is_version_str_equal() (in module mojo.pavayo.executables.version)

J

Job (class in mojo.jobManagement.jobs.job) jobDone() (Graph method)

JobList (class in mojo.jobManagement.jobs.jobList) JobListSub (class in mojo.pavayo.testcase.testSuiteComponents) JobSub (class in mojo.pavayo.testcase.testSuiteComponents)

K

key (VarAuxData attribute)

L

latex2doxygen module lookForDownloadErrors() (in module mojo.pavayo.compute)

lookForErrorsInAJobList() (in module mojo.pavayo.compute) lookForSuccess() (AbstractJob method) lookingForPictures() (in module mojo.pavayo.compute)

M

main() (in module benchTRACE) (in module contrib.analyzeTRACEMetadata) makeJob() (DistributionBuilder method) manageTestcases() (in module mojo.pavayo.compute) mapCollection() (in module contrib.analyzeTRACEMetadata) markParentProcessed() (Node method) max() (ReferenceCheckDataSet property) md() (in module mojo.bricabrac.fileIO) Membership (class in mojo.traceSuiteControl.controlfile.membershipClass) MethodJob (class in mojo.jobManagement.jobs.methodJob) min() (ReferenceCheckDataSet property) module benchTRACE bin.pavayo bin.post bin.prep bin.trace contrib.analyzeTRACEMetadata datfile datfile.tecplotFile datfile.tecplotVariable datfile.tecplotZone evaluatePerformance extensions extensions.autorun latex2doxygen mojo.analysis mojo.analysis.acousticPressureScales mojo.analysis.sampleStats mojo.analysis.windowedFFT mojo.bricabrac mojo.bricabrac.fileIO mojo.bricabrac.finiteStateMachine mojo.bricabrac.mail mojo.bricabrac.stringFormatting mojo.bricabrac.textIO mojo.cgns mojo.cgns.cgnsFile mojo.gmcplay mojo.gmcplay.gmcPlayForSpeedline mojo.gmcplay.gmcPlayJournal mojo.gmcplay.gmcplayStrings mojo.jobManagement mojo.jobManagement.graph.graph mojo.jobManagement.graph.node mojo.jobManagement.jobs.abstractJob mojo.jobManagement.jobs.job mojo.jobManagement.jobs.jobList mojo.jobManagement.jobs.methodJob mojo.jobManagement.jobs.shellJob mojo.jobManagement.jobs.TracePrepPost.qSubJob mojo.jobManagement.management.clusterInfo mojo.jobManagement.management.cpuInfo mojo.jobManagement.management.idGenerator mojo.jobManagement.management.resources mojo.latex mojo.latex.pyBibtex mojo.latex.pyDocumentClass mojo.latex.pyPackages mojo.latex.pyTex mojo.latex.pyTitlePage mojo.libdist mojo.libdist.BuildConfiguration mojo.libdist.CommandLineOptions mojo.libdist.ConfigurationFile mojo.libdist.DistributionBuilder mojo.libdist.libdistData mojo.libdist.setPrecompileFlag mojo.libdist.SourceCodeManager mojo.pavayo mojo.pavayo.compute mojo.pavayo.computeData mojo.pavayo.computeMethods mojo.pavayo.computeOptions mojo.pavayo.executables mojo.pavayo.executables.executableResources mojo.pavayo.executables.singleExecutableResource mojo.pavayo.executables.version mojo.pavayo.joblists mojo.pavayo.joblists.parallel mojo.pavayo.joblists.speedline mojo.pavayo.testcase mojo.pavayo.testcase.generalTestCase mojo.pavayo.testcase.parallelTestCase mojo.pavayo.testcase.speedlineTestCase mojo.pavayo.testcase.testSuiteComponents mojo.pavayo.testcase.testSuiteTestCase mojo.pavayo.testcase.validationSuiteParser mojo.pavayo.testcase.validationTestCase mojo.pavayo.testcase.validationTestCaseSpeedline mojo.plots mojo.plots.plotConvergence mojo.plots.plotOptions mojo.plots.plotPerformance mojo.plots.plotRadialDistributions mojo.plots.selectedItemsByNameOrId mojo.plots.setLimitsForVariables mojo.plotting mojo.plotting.figureWrapper mojo.plotting.testSuitePlot mojo.plotting.xyPlot mojo.referenceCheck mojo.referenceCheck.dataSet mojo.referenceCheck.presenter mojo.referenceCheck.referenceCheck mojo.referenceCheck.referenceCheckGeneric mojo.referenceCheck.referenceCheckHandle mojo.referenceCheck.referenceCheckMain mojo.referenceCheck.referenceCheckTree mojo.tecplot mojo.tecplot.export mojo.traceSuiteControl.analysis.cmpcFileParser mojo.traceSuiteControl.analysis.compareCGNS mojo.traceSuiteControl.controlfile mojo.traceSuiteControl.controlfile.executionmodeClass mojo.traceSuiteControl.controlfile.membershipClass mojo.traceSuiteControl.controlfile.tracecommandClass mojo.traceSuiteControl.controlfile.tracecommandlistClass mojo.traceSuiteControl.uList runXML updateXMLEntries mojo.analysis module mojo.analysis.acousticPressureScales module mojo.analysis.sampleStats module mojo.analysis.windowedFFT module mojo.bricabrac module mojo.bricabrac.fileIO module mojo.bricabrac.finiteStateMachine module mojo.bricabrac.mail module mojo.bricabrac.stringFormatting module mojo.bricabrac.textIO module mojo.cgns module mojo.cgns.cgnsFile module mojo.gmcplay module mojo.gmcplay.gmcPlayForSpeedline module mojo.gmcplay.gmcPlayJournal module mojo.gmcplay.gmcplayStrings module

mojo.jobManagement module mojo.jobManagement.graph.graph module mojo.jobManagement.graph.node module mojo.jobManagement.jobs.abstractJob module mojo.jobManagement.jobs.job module mojo.jobManagement.jobs.jobList module mojo.jobManagement.jobs.methodJob module mojo.jobManagement.jobs.shellJob module mojo.jobManagement.jobs.TracePrepPost.qSubJob module mojo.jobManagement.management.clusterInfo module mojo.jobManagement.management.cpuInfo module mojo.jobManagement.management.idGenerator module mojo.jobManagement.management.resources module mojo.latex module mojo.latex.pyBibtex module mojo.latex.pyDocumentClass module mojo.latex.pyPackages module mojo.latex.pyTex module mojo.latex.pyTitlePage module mojo.libdist module mojo.libdist.BuildConfiguration module mojo.libdist.CommandLineOptions module mojo.libdist.ConfigurationFile module mojo.libdist.DistributionBuilder module mojo.libdist.libdistData module mojo.libdist.setPrecompileFlag module mojo.libdist.SourceCodeManager module mojo.pavayo module mojo.pavayo.compute module mojo.pavayo.computeData module mojo.pavayo.computeMethods module mojo.pavayo.computeOptions module mojo.pavayo.executables module mojo.pavayo.executables.executableResources module mojo.pavayo.executables.singleExecutableResource module mojo.pavayo.executables.version module mojo.pavayo.joblists module mojo.pavayo.joblists.parallel module mojo.pavayo.joblists.speedline module mojo.pavayo.testcase module mojo.pavayo.testcase.generalTestCase module mojo.pavayo.testcase.parallelTestCase module mojo.pavayo.testcase.speedlineTestCase module mojo.pavayo.testcase.testSuiteComponents module mojo.pavayo.testcase.testSuiteTestCase module mojo.pavayo.testcase.validationSuiteParser module mojo.pavayo.testcase.validationTestCase module mojo.pavayo.testcase.validationTestCaseSpeedline module mojo.plots module mojo.plots.plotConvergence module mojo.plots.plotOptions module mojo.plots.plotPerformance module mojo.plots.plotRadialDistributions module mojo.plots.selectedItemsByNameOrId module mojo.plots.setLimitsForVariables module mojo.plotting module mojo.plotting.figureWrapper module mojo.plotting.testSuitePlot module mojo.plotting.xyPlot module mojo.referenceCheck module mojo.referenceCheck.dataSet module mojo.referenceCheck.presenter module mojo.referenceCheck.referenceCheck module mojo.referenceCheck.referenceCheckGeneric module mojo.referenceCheck.referenceCheckHandle module mojo.referenceCheck.referenceCheckMain module mojo.referenceCheck.referenceCheckTree module mojo.tecplot module mojo.tecplot.export module mojo.traceSuiteControl.analysis.cmpcFileParser module mojo.traceSuiteControl.analysis.compareCGNS module mojo.traceSuiteControl.controlfile module mojo.traceSuiteControl.controlfile.executionmodeClass module mojo.traceSuiteControl.controlfile.membershipClass module mojo.traceSuiteControl.controlfile.tracecommandClass module mojo.traceSuiteControl.controlfile.tracecommandlistClass module mojo.traceSuiteControl.uList module

N

nDataSets() (TestSuiteXYPlot property) nJobsOfStatus() (AbstractJob method) (JobList method) Node (class in mojo.jobManagement.graph.node)

nodeName (DiffFilter attribute) normaliseTRACECall() (in module benchTRACE) NotFoundConstantException NotValidAgainstXmlException

O

onValidCluster() (ClusterInfo class method) OpInitialisationGlobalPerRowSub (class in mojo.pavayo.testcase.testSuiteComponents) OpInitialisationGlobalSub (class in mojo.pavayo.testcase.testSuiteComponents)

OpListSub (class in mojo.pavayo.testcase.testSuiteComponents) OpSub (class in mojo.pavayo.testcase.testSuiteComponents) ordonateTraceCommand() (Tracecommand method)

P

ParallelTestCaseSub (class in mojo.pavayo.testcase.parallelTestCase) parse() (CommandLineOptions method) parseCmpcFile() (in module mojo.traceSuiteControl.analysis.cmpcFileParser) parseCommandLine() (in module mojo.libdist.CommandLineOptions) parseInput() (in module benchTRACE) parseOptions() (in module updateXMLEntries) parsePavayo() (in module mojo.pavayo.testcase.validationSuiteParser) performCheck() (ReferenceCheckHandle method) (ReferenceCheckMain method) plot_results() (SampleStats method) plotConvergenceReport() (ValidationTestCaseSub method) plotData() (ReferenceCheckPresenter method) (TestSuiteXYPlot method) plotOptionParser() (in module mojo.plots.plotOptions) plotPerformanceMap() (ValidationTestCaseSub method) plotRadialDistribution() (ValidationTestCaseSub method) plotResidualReport() (ValidationTestCaseSub method) PostProcAction (class in mojo.pavayo.computeOptions) prepareOutFile() (AbstractJob method) prepareSourceFiles() (TestSuiteTestCaseSub static method)

prepareTestcases() (in module mojo.pavayo.compute) print_dominatingFrequencies() (SampleStats method) print_stats() (SampleStats method) printColorful() (Color static method) Printer (class in mojo.bricabrac.fileIO) Printer.Verbosity (class in mojo.bricabrac.fileIO) printFileListing() (Color static method) printGraph() (Graph method) printOptions() (in module mojo.pavayo.computeOptions) printScreen() (Splashscreen method) processRadialDistributions() (in module mojo.plots.plotRadialDistributions) processResidualData() (in module mojo.plots.plotConvergence) processSingleSpeedline() (in module mojo.plots.plotPerformance) processTraceSuitePath() (in module mojo.pavayo.computeMethods) pureText() (in module datfile.tecplotFile) (in module mojo.bricabrac.fileIO) PyBibtex (class in mojo.latex.pyBibtex) PyDocumentClass (class in mojo.latex.pyDocumentClass) PyPackages (class in mojo.latex.pyPackages) PyTex (class in mojo.latex.pyTex) PyTitlePage (class in mojo.latex.pyTitlePage)

Q

QSubJob (class in mojo.jobManagement.jobs.TracePrepPost.qSubJob)

R

readData() (TestSuiteXYPlot method) readErrorFiles() (in module mojo.pavayo.compute) readFile() (TecplotDataset method) readHeaderArgumentsFromLine() (TecplotDataZone method) readJsonFile() (ReferenceCheckTree static method) readXML() (ConfigurationFile method) ref() (ReferenceCheckHandle property) ReferenceCheck (class in mojo.referenceCheck.referenceCheck) ReferenceCheckDataSet (class in mojo.referenceCheck.dataSet) ReferenceCheckGeneric (class in mojo.referenceCheck.referenceCheckGeneric) ReferenceCheckHandle (class in mojo.referenceCheck.referenceCheckHandle) ReferenceCheckMain (class in mojo.referenceCheck.referenceCheckMain) ReferenceCheckPresenter (class in mojo.referenceCheck.presenter) ReferenceCheckTree (class in mojo.referenceCheck.referenceCheckTree) refFilePath() (TestSuiteXYPlot property) refPlotDict() (TestSuiteXYPlot property) releaseResources() (Resources method) removeAllSettings() (Tracecommand method) removeCommandItem() (TraceCommandList method) removeCommandLine() (TraceCommandList method) removeFile() (in module mojo.bricabrac.fileIO) removeSettings() (Tracecommand method)

replaceInFile() (in module mojo.libdist.setPrecompileFlag) reset() (Graph method) (IdGenerator method) resize() (TecplotDataVariable method) resizeVariables() (TecplotDataZone method) Resources (class in mojo.jobManagement.management.resources) resourcesAvailable() (AbstractJob method) (Resources method) resourcesDict() (Resources property) RestartSetupSub (class in mojo.pavayo.testcase.testSuiteComponents) RestartValidationOpListSub (class in mojo.pavayo.testcase.testSuiteComponents) RestartValidationOpSub (class in mojo.pavayo.testcase.testSuiteComponents) RowListSub (class in mojo.pavayo.testcase.testSuiteComponents) RowSub (class in mojo.pavayo.testcase.testSuiteComponents) run() (FiniteStateMachine method) runJob() (AbstractJob method) (JobList method) (MethodJob method) (QSubJob method) (ShellJob method) runJoblist() (JobList method) runXML module

S

SampleStats (class in mojo.analysis.sampleStats) sanityTest() (Graph method) saveAsNumpy() (TecplotDataZone method) saveFigure() (FigureWrapper method) saveJournalFile() (GmcPlayForSpeedline method) scanTexFile() (in module mojo.pavayo.compute) sci_notation() (in module mojo.bricabrac.stringFormatting) SCM (class in mojo.libdist.SourceCodeManager) searchReplaceInFile() (in module mojo.bricabrac.fileIO) SelectedItemsByNameOrId (class in mojo.plots.selectedItemsByNameOrId) send() (Email method) set_from() (Email method) set_htmlbody() (Email method) set_subject() (Email method) set_textbody() (Email method) set_windowing_params() (AcousticPressureScales method) setBibtex() (PyTex method) setData() (TecplotDataZone method) setfileName() (PyTex method) setFormatersAndLocators() (XYPlot method) setInitialState() (FiniteStateMachine method) SetLimitsForVariables (class in mojo.plots.setLimitsForVariables) setPrecompile() (in module mojo.libdist.setPrecompileFlag) setPreprocessorMacroInFile() (in module mojo.libdist.setPrecompileFlag) setStatus() (Node method) setTitle() (PyTex method) setup() (DistributionBuilder method) SetupSub (class in mojo.pavayo.testcase.testSuiteComponents) setVariablesFromLine() (TecplotDataZone method) setVarlocation() (TecplotDataZone method)

setVerbosity() (Printer class method) setWindowOverlap() (WindowedFFT method) setWindowSize() (WindowedFFT method) setWindowType() (WindowedFFT method) ShellJob (class in mojo.jobManagement.jobs.shellJob) showFigure() (FigureWrapper method) showKeywords() (in module mojo.pavayo.compute) showSelected() (in module mojo.pavayo.compute) showTestcases() (in module mojo.pavayo.compute) sigterm_handler() (JobList static method) SimulationJobSub (class in mojo.pavayo.testcase.testSuiteComponents) SingleExecutableResource (class in mojo.pavayo.executables.singleExecutableResource) slice() (TecplotDataZone method) SliceSub (class in mojo.pavayo.testcase.testSuiteComponents) solutionName() (ReferenceCheckHandle property) SourceCodeManager (class in mojo.libdist.SourceCodeManager) SpeedlineTestCaseSub (class in mojo.pavayo.testcase.speedlineTestCase) Splashscreen (class in mojo.bricabrac.stringFormatting) splitLine() (TecplotDataset class method) splitListInChunks() (in module mojo.bricabrac.stringFormatting) startJob() (AbstractJob method) stop() (AbstractJob method) (JobList method) (MethodJob method) (QSubJob method) (ShellJob method) stringHeader() (TecplotDataset method) stringZone() (TecplotDataZone method) StrSub (class in mojo.pavayo.testcase.testSuiteComponents) SuiteSub (class in mojo.pavayo.testcase.testSuiteComponents)

T

tag (VarAuxData attribute) TclistSub (class in mojo.pavayo.testcase.testSuiteComponents) TecplotDataset (class in datfile.tecplotFile) TecplotDataVariable (class in datfile.tecplotVariable) TecplotDataZone (class in datfile.tecplotZone)

testDistribution() (DistributionBuilder method) TestSuiteTestCaseSub (class in mojo.pavayo.testcase.testSuiteTestCase) TestSuiteXYPlot (class in mojo.plotting.testSuitePlot) tolerances() (ReferenceCheckMain property) Tracecommand (class in mojo.traceSuiteControl.controlfile.tracecommandClass) TraceCommandList (class in mojo.traceSuiteControl.controlfile.tracecommandlistClass)

U

update() (JobList method) (Resources method) updateAccuracyDict() (TestSuiteTestCaseSub class method) updateDictFromXML() (ExecutableResources method) UpdateMeshDataAction (class in mojo.pavayo.computeOptions) updateReferences() (in module mojo.pavayo.compute) (TestSuiteTestCaseSub method) updateStatus() (AbstractJob method) (JobList method) (MethodJob method) (QSubJob method) (ShellJob method)

updateXMLEntries module updateXMLEntries() (in module updateXMLEntries) uploadTestcases() (in module mojo.pavayo.compute)

V

validate_emailaddress() (Email method) validateWithSchema() (ConfigurationFile method) ValidationOpListSub (class in mojo.pavayo.testcase.testSuiteComponents) ValidationOpSub (class in mojo.pavayo.testcase.testSuiteComponents) ValidationTestCaseSpeedlineSub (class in mojo.pavayo.testcase.validationTestCaseSpeedline) ValidationTestCaseSub (class in mojo.pavayo.testcase.validationTestCase) value (VarAuxData attribute) VarAuxData (class in datfile.tecplotFile)

variable_result() (ReferenceCheck property) variableIndex (VarAuxData attribute) verbosePrint() (Printer class method) Version (class in mojo.pavayo.executables.version) version() (SingleExecutableResource property) vertexToCellCenteredStructured() (in module mojo.cgns.cgnsFile) vertexToCellCenteredUnstructured() (in module mojo.cgns.cgnsFile) viewDependencies() (JobList static method) viewJobs() (JobList method)

W

waitUntilFinished() (AbstractJob method) warning() (Printer class method) WindowedFFT (class in mojo.analysis.windowedFFT) withinTolerance() (ReferenceCheckMain method) workingDirectory() (in module mojo.bricabrac.fileIO) writeCommandFile() (TraceCommandList method)

writeData() (FigureWrapper method) writeFile() (TecplotDataset method) writeGmcCommandFile() (GmcPlayForSpeedline method) writeLatexFile() (PyTex method) writeToJSON() (ExecutableResources method) writeXmlFile() (in module mojo.pavayo.testcase.validationSuiteParser)

X

XYPlot (class in mojo.plotting.xyPlot)

Z

zoneName() (ReferenceCheckHandle property)